Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SAMN05444680_10890 | Not Available | Negative | 4275556 - 4276383 | 30774.7 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444680_10891 | Not Available | Negative | 4276517 - 4277191 | 24660.6 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05444680_10892 | Not Available | Negative | 4277188 - 4278456 | 43589.6 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444680_10893 | Not Available | Negative | 4278453 - 4279349 | 30627.1 |
| pyruvate dehydrogenase e1 component | SAMN05444680_10894 | Not Available | Negative | 4279466 - 4282102 | 95699.6 |
| dna-binding transcriptional regulator, lrp family | SAMN05444680_10895 | Not Available | Positive | 4282209 - 4282673 | 17071.8 |
| glutamate dehydrogenase (nad) | SAMN05444680_10896 | Not Available | Negative | 4282684 - 4287579 | 180016.0 |
| hypothetical protein | SAMN05444680_10897 | Not Available | Positive | 4287710 - 4290112 | 83698.1 |
| membrane-bound lytic murein transglycosylase a | SAMN05444680_10898 | Not Available | Negative | 4290242 - 4291381 | 41847.9 |
| outer membrane protein ompa | SAMN05444680_10899 | Not Available | Positive | 4291743 - 4292405 | 22631.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
