Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranyl reductase family | SAMN05444680_10880 | Not Available | Negative | 4265786 - 4266997 | 42278.2 |
| creatinine amidohydrolase | SAMN05444680_10881 | Not Available | Positive | 4267263 - 4268084 | 30000.8 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_10882 | Not Available | Positive | 4268089 - 4268889 | 29324.5 |
| nitt/taut family transport system permease protein | SAMN05444680_10883 | Not Available | Positive | 4268867 - 4269748 | 31748.7 |
| fad/fmn-containing dehydrogenase | SAMN05444680_10884 | Not Available | Positive | 4269760 - 4271154 | 51046.1 |
| nitt/taut family transport system substrate-binding protein | SAMN05444680_10885 | Not Available | Positive | 4271192 - 4272211 | 37647.0 |
| vanillate o-demethylase ferredoxin subunit | SAMN05444680_10886 | Not Available | Positive | 4272225 - 4273190 | 34623.7 |
| transcriptional regulator, tetr family | SAMN05444680_10887 | Not Available | Positive | 4273228 - 4273902 | 25243.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444680_10888 | Not Available | Negative | 4273914 - 4274372 | 16808.2 |
| cytosine deaminase | SAMN05444680_10889 | Not Available | Negative | 4274369 - 4275559 | 42661.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
