Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase | SAMN05444680_10870 | Not Available | Negative | 4253414 - 4257031 | 131207.0 |
| dna-binding transcriptional regulator, lrp family | SAMN05444680_10871 | Not Available | Positive | 4257205 - 4257693 | 18057.7 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_10872 | Not Available | Positive | 4257716 - 4259338 | 58451.4 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05444680_10873 | Not Available | Positive | 4259420 - 4260532 | 40463.3 |
| cytochrome c oxidase subunit iv | SAMN05444680_10874 | Not Available | Negative | 4260537 - 4260866 | 12367.8 |
| cytochrome c oxidase subunit 3 | SAMN05444680_10875 | Not Available | Negative | 4260875 - 4261570 | 25524.2 |
| cytochrome c oxidase subunit 3 | SAMN05444680_10876 | Not Available | Negative | 4261581 - 4262201 | 22361.8 |
| cytochrome c oxidase subunit 1 | SAMN05444680_10877 | Not Available | Negative | 4262198 - 4263973 | 65555.1 |
| cytochrome c oxidase subunit 2 | SAMN05444680_10878 | Not Available | Negative | 4263970 - 4265130 | 42207.1 |
| hypothetical protein | SAMN05444680_10879 | Not Available | Negative | 4265183 - 4265698 | 18586.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
