Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | SAMN05444680_10860 | Not Available | Negative | 4241804 - 4242754 | 33137.9 |
| hypothetical protein | SAMN05444680_10861 | Not Available | Negative | 4242760 - 4243248 | 18236.7 |
| peptide deformylase | SAMN05444680_10862 | Not Available | Negative | 4243251 - 4243784 | 19850.9 |
| lysm domain-containing protein | SAMN05444680_10863 | Not Available | Positive | 4243945 - 4245156 | 43862.8 |
| dna protecting protein dpra | SAMN05444680_10864 | Not Available | Positive | 4245175 - 4246317 | 39879.6 |
| smg protein | SAMN05444680_10865 | Not Available | Positive | 4246402 - 4246917 | 18930.4 |
| protein of unknown function | SAMN05444680_10866 | Not Available | Negative | 4247188 - 4249581 | 86307.5 |
| protein translocase subunit secf | SAMN05444680_10867 | Not Available | Negative | 4249713 - 4250666 | 35024.0 |
| preprotein translocase subunit secd | SAMN05444680_10868 | Not Available | Negative | 4250679 - 4252556 | 67362.1 |
| protein translocase subunit yajc | SAMN05444680_10869 | Not Available | Negative | 4252826 - 4253101 | 9933.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
