Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444680_10850 | Not Available | Negative | 4232780 - 4233688 | 33536.8 |
| catechol 2,3-dioxygenase | SAMN05444680_10851 | Not Available | Positive | 4233781 - 4234344 | 20748.7 |
| hypothetical protein | SAMN05444680_10852 | Not Available | Positive | 4234337 - 4235458 | 40759.6 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444680_10853 | Not Available | Positive | 4235476 - 4237116 | 59805.1 |
| protein of unknown function | SAMN05444680_10854 | Not Available | Positive | 4237129 - 4237320 | 6666.82 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444680_10855 | Not Available | Positive | 4237347 - 4238306 | 35236.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10856 | Not Available | Positive | 4238345 - 4239316 | 34719.4 |
| hypothetical protein | SAMN05444680_10857 | Not Available | Positive | 4239381 - 4240715 | 48577.4 |
| branched-chain amino acid transport protein | SAMN05444680_10858 | Not Available | Negative | 4240720 - 4241067 | 12447.4 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN05444680_10859 | Not Available | Negative | 4241064 - 4241804 | 26818.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
