Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c transport system permease protein | SAMN05444680_101351 | Not Available | Negative | 367944 - 368975 | 38023.3 |
| microcin c transport system substrate-binding protein | SAMN05444680_101352 | Not Available | Negative | 368982 - 370769 | 67717.5 |
| enoyl-[acyl-carrier-protein] reductase | SAMN05444680_101353 | Not Available | Positive | 370834 - 371625 | 27824.4 |
| dna ligase-1 | SAMN05444680_101354 | Not Available | Positive | 371683 - 372594 | 33738.4 |
| ornithine decarboxylase | SAMN05444680_101355 | Not Available | Negative | 372640 - 374910 | 85070.7 |
| membrane protein implicated in regulation of membrane protease activity | SAMN05444680_101356 | Not Available | Positive | 375031 - 375462 | 14958.1 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05444680_101357 | Not Available | Positive | 375489 - 376421 | 33893.8 |
| Trna-ser | Not Available | Not Available | Positive | 376463 - 376550 | Not Available |
| carbonic anhydrase | SAMN05444680_101359 | Not Available | Positive | 376703 - 377464 | 27738.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_101360 | Not Available | Negative | 377525 - 378742 | 42004.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
