Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444680_10820 | Not Available | Positive | 4202562 - 4203476 | 33635.7 |
| acyl-coa hydrolase | SAMN05444680_10821 | Not Available | Positive | 4203505 - 4203951 | 15884.1 |
| fumarylacetoacetate hydrolase | SAMN05444680_10822 | Not Available | Negative | 4204009 - 4205286 | 45798.1 |
| homogentisate 1,2-dioxygenase | SAMN05444680_10823 | Not Available | Negative | 4205283 - 4206587 | 48050.7 |
| protein of unknown function | SAMN05444680_10824 | Not Available | Negative | 4206761 - 4206952 | 6852.08 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444680_10825 | Not Available | Negative | 4206957 - 4208621 | 61294.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444680_10826 | Not Available | Negative | 4208626 - 4209585 | 35282.9 |
| transcriptional regulator, iclr family | SAMN05444680_10827 | Not Available | Positive | 4209709 - 4210536 | 29537.7 |
| uncharacterized conserved protein | SAMN05444680_10828 | Not Available | Negative | 4210517 - 4211005 | 18024.7 |
| uncharacterized conserved protein, duf1501 family | SAMN05444680_10829 | Not Available | Negative | 4211109 - 4212605 | 52540.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
