Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444680_10810 | Not Available | Negative | 4190511 - 4191290 | 28550.0 |
| two component transcriptional regulator, luxr family | SAMN05444680_10811 | Not Available | Negative | 4191555 - 4192187 | 22840.8 |
| excinuclease abc subunit a | SAMN05444680_10812 | Not Available | Positive | 4192319 - 4195450 | 115024.0 |
| f-type h+-transporting atpase subunit c | SAMN05444680_10813 | Not Available | Positive | 4195582 - 4195821 | 8137.04 |
| 2,4-dienoyl-coa reductase | SAMN05444680_10814 | Not Available | Negative | 4195984 - 4197096 | 39195.1 |
| acyl-coa thioesterase-2 | SAMN05444680_10815 | Not Available | Negative | 4197131 - 4198048 | 33509.2 |
| fad dependent oxidoreductase | SAMN05444680_10816 | Not Available | Negative | 4198132 - 4199481 | 47666.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10817 | Not Available | Negative | 4199478 - 4200455 | 33768.3 |
| fumarylpyruvate hydrolase | SAMN05444680_10818 | Not Available | Negative | 4200569 - 4201273 | 25393.4 |
| gentisate 1,2-dioxygenase | SAMN05444680_10819 | Not Available | Negative | 4201368 - 4202438 | 39497.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
