Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_107260 | Not Available | Positive | 4182174 - 4182635 | 16928.6 |
| arginine:ornithine antiporter / lysine permease | SAMN05444680_1081 | Not Available | Negative | 4183071 - 4183180 | 3834.83 |
| outer membrane lipoprotein slyb | SAMN05444680_1082 | Not Available | Positive | 4183447 - 4183890 | 14938.3 |
| di-and tricarboxylate transporter | SAMN05444680_1083 | Not Available | Positive | 4183996 - 4185825 | 63967.1 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444680_1084 | Not Available | Negative | 4185822 - 4186196 | 13239.2 |
| arylformamidase | SAMN05444680_1085 | Not Available | Negative | 4186208 - 4187077 | 30780.6 |
| tryptophan 2,3-dioxygenase | SAMN05444680_1086 | Not Available | Negative | 4187086 - 4187943 | 32973.6 |
| aromatic-amino-acid transaminase | SAMN05444680_1087 | Not Available | Negative | 4187949 - 4189166 | 44699.4 |
| transcriptional regulator, asnc family | SAMN05444680_1088 | Not Available | Positive | 4189284 - 4189757 | 17670.2 |
| single-strand binding protein | SAMN05444680_1089 | Not Available | Negative | 4189812 - 4190351 | 18848.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
