Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_107230 | Not Available | Positive | 4156283 - 4156489 | 7630.35 |
| type ii protein arginine methyltransferase | SAMN05444680_107231 | Not Available | Negative | 4156592 - 4158217 | 59906.8 |
| hypothetical protein | SAMN05444680_107232 | Not Available | Positive | 4158226 - 4158528 | 11121.7 |
| pas domain s-box-containing protein | SAMN05444680_107233 | Not Available | Positive | 4158552 - 4160378 | 66711.0 |
| two component transcriptional regulator, luxr family | SAMN05444680_107234 | Not Available | Positive | 4160375 - 4161013 | 22999.7 |
| response regulator receiver domain-containing protein | SAMN05444680_107235 | Not Available | Positive | 4161066 - 4161440 | 13209.9 |
| fha domain-containing protein | SAMN05444680_107236 | Not Available | Positive | 4161546 - 4161935 | 13998.0 |
| hypothetical protein | SAMN05444680_107237 | Not Available | Positive | 4162030 - 4162596 | 21192.7 |
| tetratricopeptide repeat-containing protein | SAMN05444680_107238 | Not Available | Negative | 4162694 - 4163539 | 29465.5 |
| abc-type transporter mla maintaining outer membrane lipid asymmetry, component mlad | SAMN05444680_107239 | Not Available | Negative | 4163536 - 4164489 | 33608.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
