Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caspase domain-containing protein | SAMN05444680_107210 | Not Available | Negative | 4136990 - 4137829 | 29331.2 |
| hypothetical protein | SAMN05444680_107211 | Not Available | Negative | 4137835 - 4138452 | 22268.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_107212 | Not Available | Negative | 4138557 - 4139153 | 22471.6 |
| membrane glycosyltransferase | SAMN05444680_107213 | Not Available | Negative | 4139261 - 4141039 | 64428.2 |
| cytochrome b561 | SAMN05444680_107214 | Not Available | Negative | 4141036 - 4141569 | 19661.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_107215 | Not Available | Negative | 4141657 - 4142646 | 34576.4 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444680_107216 | Not Available | Positive | 4142793 - 4143350 | 21167.2 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444680_107217 | Not Available | Positive | 4143343 - 4144842 | 54538.5 |
| transcriptional regulator, iclr family | SAMN05444680_107218 | Not Available | Positive | 4144897 - 4145616 | 26342.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_107219 | Not Available | Positive | 4145657 - 4146505 | 30806.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
