Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impl | SAMN05444680_107200 | Not Available | Negative | 4125664 - 4128987 | 120398.0 |
| type vi secretion system protein impk | SAMN05444680_107201 | Not Available | Negative | 4128984 - 4130108 | 38812.8 |
| carboxyl-terminal processing protease | SAMN05444680_107202 | Not Available | Negative | 4130108 - 4131301 | 43931.5 |
| outer membrane protein ompa | SAMN05444680_107203 | Not Available | Negative | 4131445 - 4132050 | 21301.6 |
| putative auto-transporter adhesin, head gin domain | SAMN05444680_107204 | Not Available | Negative | 4132112 - 4132846 | 25385.4 |
| hypothetical protein | SAMN05444680_107205 | Not Available | Negative | 4132879 - 4133298 | 14595.9 |
| protein of unknown function | SAMN05444680_107206 | Not Available | Negative | 4133282 - 4134886 | 57937.4 |
| hypothetical protein | SAMN05444680_107207 | Not Available | Negative | 4134913 - 4135236 | 11320.6 |
| hypothetical protein | SAMN05444680_107208 | Not Available | Negative | 4135307 - 4135879 | 18752.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_107209 | Not Available | Positive | 4136021 - 4136980 | 34448.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
