Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama domain-containing membrane protein rard | SAMN05444680_101341 | Not Available | Negative | 354632 - 355549 | 32281.6 |
| gtp-binding protein | SAMN05444680_101342 | Not Available | Negative | 355549 - 357381 | 67310.0 |
| trna pseudouridine synthase b | SAMN05444680_101343 | Not Available | Negative | 357378 - 358325 | 33747.6 |
| ribosome-binding factor a | SAMN05444680_101344 | Not Available | Negative | 358328 - 358699 | 13728.5 |
| bacterial translation initiation factor 2 (bif-2) | SAMN05444680_101345 | Not Available | Negative | 358836 - 361763 | 104546.0 |
| nusa antitermination factor | SAMN05444680_101346 | Not Available | Negative | 361788 - 363272 | 54987.6 |
| ribosome maturation factor rimp | SAMN05444680_101347 | Not Available | Negative | 363290 - 363958 | 24243.9 |
| uncharacterised mfs-type transporter ybfb | SAMN05444680_101348 | Not Available | Negative | 364066 - 365271 | 41304.3 |
| microcin c transport system atp-binding protein | SAMN05444680_101349 | Not Available | Negative | 365289 - 366902 | 57719.2 |
| microcin c transport system permease protein | SAMN05444680_101350 | Not Available | Negative | 366899 - 367951 | 38873.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
