Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein | SAMN05444680_102684 | Not Available | Negative | 1725264 - 1726154 | 31665.1 |
| Baseplate assembly protein | SAMN05444680_102685 | Not Available | Negative | 1726151 - 1726513 | 13079.1 |
| Phage baseplate assembly protein | SAMN05444680_102686 | Not Available | Negative | 1726510 - 1727091 | 19084.5 |
| response regulator receiver domain-containing protein | SAMN05444680_102687 | Not Available | Positive | 1727487 - 1728179 | 24478.3 |
| adenylate cyclase, class 3 | SAMN05444680_102688 | Not Available | Positive | 1728278 - 1729621 | 48765.2 |
| signal transduction histidine kinase | SAMN05444680_102689 | Not Available | Negative | 1729677 - 1730831 | 41403.5 |
| Phage virion morphogenesis protein | SAMN05444680_102690 | Not Available | Negative | 1731075 - 1731311 | 8922.87 |
| Predicted tail completion | SAMN05444680_102691 | Not Available | Negative | 1731530 - 1732042 | 18739.1 |
| Endolysin | SAMN05444680_102692 | Not Available | Negative | 1732036 - 1732617 | 21344.0 |
| hypothetical protein | SAMN05444680_102693 | Not Available | Negative | 1732614 - 1732979 | 12800.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
