Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05444680_107180 | Not Available | Positive | 4104232 - 4105173 | 34066.9 |
| peptide/nickel transport system permease protein | SAMN05444680_107181 | Not Available | Positive | 4105184 - 4106134 | 33561.7 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_107182 | Not Available | Positive | 4106139 - 4107824 | 61189.9 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05444680_107183 | Not Available | Positive | 4107845 - 4109359 | 53437.9 |
| hippurate hydrolase | SAMN05444680_107184 | Not Available | Positive | 4109392 - 4110579 | 42649.9 |
| uncharacterized membrane protein, oligopeptide transporter (opt) family | SAMN05444680_107185 | Not Available | Negative | 4110587 - 4112317 | 60328.4 |
| protein of unknown function | SAMN05444680_107186 | Not Available | Negative | 4112401 - 4112634 | 8690.06 |
| cytochrome p450 | SAMN05444680_107187 | Not Available | Positive | 4112801 - 4114285 | 54566.9 |
| transcriptional regulator, lysr family | SAMN05444680_107188 | Not Available | Negative | 4114282 - 4115205 | 33621.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_107189 | Not Available | Positive | 4115299 - 4116273 | 33353.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
