Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| salicylate hydroxylase | SAMN05444680_107160 | Not Available | Positive | 4081737 - 4082927 | 43225.5 |
| cytochrome b561 | SAMN05444680_107161 | Not Available | Positive | 4082989 - 4083558 | 20695.9 |
| hypothetical protein | SAMN05444680_107162 | Not Available | Negative | 4083730 - 4084281 | 19343.2 |
| protein of unknown function | SAMN05444680_107163 | Not Available | Positive | 4084549 - 4084905 | 12695.7 |
| outer membrane protein tolc | SAMN05444680_107164 | Not Available | Negative | 4085267 - 4086802 | 52348.7 |
| multidrug resistance protein mdto | SAMN05444680_107165 | Not Available | Negative | 4086789 - 4088765 | 69135.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_107166 | Not Available | Negative | 4088746 - 4089789 | 37329.6 |
| uncharacterised protein family protein | SAMN05444680_107167 | Not Available | Negative | 4089786 - 4090046 | 8760.23 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN05444680_107168 | Not Available | Positive | 4090222 - 4091607 | 49328.4 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_107169 | Not Available | Negative | 4091594 - 4093129 | 55353.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
