Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of rnase e activity rraa | SAMN05444680_107140 | Not Available | Negative | 4063599 - 4064270 | 23690.4 |
| aspartate aminotransferase | SAMN05444680_107141 | Not Available | Negative | 4064288 - 4065496 | 43174.7 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05444680_107142 | Not Available | Positive | 4065596 - 4066606 | 35835.0 |
| biotin carboxyl carrier protein | SAMN05444680_107143 | Not Available | Positive | 4066724 - 4067167 | 15582.6 |
| biotin carboxylase /acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05444680_107144 | Not Available | Positive | 4067172 - 4068524 | 48653.2 |
| sensor histidine kinase inhibitor, kipi family | SAMN05444680_107145 | Not Available | Positive | 4068521 - 4069249 | 25339.4 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05444680_107146 | Not Available | Positive | 4069246 - 4070232 | 34847.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN05444680_107147 | Not Available | Positive | 4070234 - 4070644 | 14287.1 |
| upf0271 protein | SAMN05444680_107148 | Not Available | Positive | 4070665 - 4071453 | 27599.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_107149 | Not Available | Positive | 4071542 - 4072294 | 26504.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
