Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_107130 | Not Available | Negative | 4054037 - 4055014 | 33666.5 |
| transcriptional regulator, iclr family | SAMN05444680_107131 | Not Available | Positive | 4055163 - 4055990 | 29813.0 |
| transcriptional regulator, arac family | SAMN05444680_107132 | Not Available | Negative | 4056002 - 4056898 | 32873.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_107133 | Not Available | Positive | 4057027 - 4058013 | 34980.2 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444680_107134 | Not Available | Positive | 4058016 - 4059758 | 61646.2 |
| uncharacterized conserved protein glcg, duf336 family | SAMN05444680_107135 | Not Available | Positive | 4059782 - 4060207 | 14327.2 |
| l-idonate 5-dehydrogenase | SAMN05444680_107136 | Not Available | Negative | 4060232 - 4061266 | 36563.2 |
| gluconate 5-dehydrogenase | SAMN05444680_107137 | Not Available | Negative | 4061286 - 4062059 | 27391.0 |
| gluconate kinase, ski family | SAMN05444680_107138 | Not Available | Negative | 4062034 - 4062582 | 19614.6 |
| gluconate 2-dehydrogenase | SAMN05444680_107139 | Not Available | Negative | 4062586 - 4063581 | 35176.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
