Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_107120 | Not Available | Positive | 4041798 - 4042277 | 16424.3 |
| protein of unknown function | SAMN05444680_107121 | Not Available | Positive | 4042300 - 4042584 | 10267.1 |
| cu+-exporting atpase | SAMN05444680_107122 | Not Available | Positive | 4042660 - 4044879 | 77444.5 |
| putative methyltransferase, lic12133 family | SAMN05444680_107123 | Not Available | Positive | 4045031 - 4045897 | 32633.2 |
| uncharacterized conserved protein | SAMN05444680_107124 | Not Available | Positive | 4046021 - 4046500 | 17049.6 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN05444680_107125 | Not Available | Positive | 4046497 - 4046847 | 12325.0 |
| acetoacetyl-coa synthetase | SAMN05444680_107126 | Not Available | Positive | 4047415 - 4049451 | 74301.8 |
| prolyl oligopeptidase family protein | SAMN05444680_107127 | Not Available | Negative | 4049448 - 4051025 | 54611.4 |
| acyl-coa synthetase (ndp forming) | SAMN05444680_107128 | Not Available | Negative | 4051145 - 4053226 | 72190.5 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444680_107129 | Not Available | Negative | 4053223 - 4054005 | 27994.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
