Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_107110 | Not Available | Negative | 4031816 - 4032790 | 34224.1 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444680_107111 | Not Available | Negative | 4032835 - 4034388 | 56640.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_107112 | Not Available | Negative | 4034385 - 4035251 | 30967.9 |
| catechol-2,3-dioxygenase | SAMN05444680_107113 | Not Available | Negative | 4035276 - 4036181 | 33139.3 |
| aminocarboxymuconate-semialdehyde decarboxylase | SAMN05444680_107114 | Not Available | Negative | 4036178 - 4037212 | 37221.9 |
| transcriptional regulator, lysr family | SAMN05444680_107115 | Not Available | Positive | 4037298 - 4038224 | 34545.7 |
| ytka-like | SAMN05444680_107116 | Not Available | Positive | 4038367 - 4039188 | 29681.8 |
| cytochrome c peroxidase | SAMN05444680_107117 | Not Available | Positive | 4039185 - 4040483 | 47192.5 |
| arac-type dna-binding protein | SAMN05444680_107118 | Not Available | Negative | 4040471 - 4041283 | 29457.4 |
| copper chaperone | SAMN05444680_107119 | Not Available | Positive | 4041479 - 4041745 | 9126.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
