Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | SAMN05444680_101331 | Not Available | Negative | 348258 - 349727 | 51674.4 |
| hypothetical protein | SAMN05444680_101332 | Not Available | Positive | 349899 - 350411 | 18498.1 |
| hypothetical protein | SAMN05444680_101333 | Not Available | Negative | 350431 - 350766 | 11972.3 |
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN05444680_101334 | Not Available | Negative | 350766 - 351212 | 16610.9 |
| ssra-binding protein | SAMN05444680_101335 | Not Available | Positive | 351275 - 351754 | 18322.3 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMN05444680_101336 | Not Available | Positive | 351765 - 352340 | 20612.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_101337 | Not Available | Positive | 352411 - 352920 | 19156.3 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN05444680_101338 | Not Available | Positive | 352927 - 353661 | 26240.0 |
| predicted lipoprotein with conserved yx(fwy)xxd motif | SAMN05444680_101339 | Not Available | Positive | 353707 - 354090 | 13278.9 |
| yxwgxw repeat-containing protein | SAMN05444680_101340 | Not Available | Negative | 354154 - 354564 | 15437.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
