Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_10780 | Not Available | Positive | 4006896 - 4007675 | 27196.6 |
| hypothetical protein | SAMN05444680_10781 | Not Available | Positive | 4007687 - 4008055 | 13302.8 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444680_10782 | Not Available | Positive | 4008052 - 4008999 | 34054.9 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_10783 | Not Available | Positive | 4009017 - 4010225 | 44071.7 |
| tetratricopeptide repeat-containing protein | SAMN05444680_10784 | Not Available | Negative | 4010263 - 4010940 | 23820.2 |
| hypothetical protein | SAMN05444680_10785 | Not Available | Negative | 4010974 - 4011585 | 20906.7 |
| hypothetical protein | SAMN05444680_10786 | Not Available | Negative | 4011645 - 4011959 | 10766.9 |
| sensor histidine kinase yesm | SAMN05444680_10787 | Not Available | Positive | 4012396 - 4013469 | 38916.8 |
| histidine kinase | SAMN05444680_10788 | Not Available | Positive | 4013466 - 4014632 | 42857.5 |
| two component transcriptional regulator, lyttr family | SAMN05444680_10789 | Not Available | Positive | 4014610 - 4015350 | 27813.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
