Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase, c-terminal domain | SAMN05444680_10770 | Not Available | Negative | 3995172 - 3996134 | 33469.7 |
| acyl-coa dehydrogenase | SAMN05444680_10771 | Not Available | Negative | 3996131 - 3997348 | 45042.0 |
| acyl-coa synthetase (ndp forming) | SAMN05444680_10772 | Not Available | Negative | 3997357 - 3999498 | 73859.7 |
| short chain enoyl-coa hydratase | SAMN05444680_10773 | Not Available | Negative | 3999501 - 4000271 | 28126.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10774 | Not Available | Negative | 4000292 - 4001302 | 35892.2 |
| sugar lactone lactonase yvre | SAMN05444680_10775 | Not Available | Positive | 4001609 - 4002484 | 30903.0 |
| transcriptional regulator, lysr family | SAMN05444680_10776 | Not Available | Negative | 4002481 - 4003443 | 35931.6 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05444680_10777 | Not Available | Positive | 4003555 - 4004622 | 40076.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10778 | Not Available | Positive | 4004623 - 4005621 | 34919.0 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05444680_10779 | Not Available | Positive | 4005812 - 4006879 | 39748.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
