Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10750 | Not Available | Negative | 3974984 - 3975970 | 34067.4 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_10751 | Not Available | Negative | 3976018 - 3977163 | 41281.3 |
| hydroxymethylglutaryl-coa lyase | SAMN05444680_10752 | Not Available | Negative | 3977178 - 3978125 | 33070.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_10753 | Not Available | Positive | 3978234 - 3979184 | 34522.7 |
| nte family protein | SAMN05444680_10754 | Not Available | Positive | 3979218 - 3980339 | 40624.6 |
| uncharacterized domain 1-containing protein | SAMN05444680_10755 | Not Available | Negative | 3980354 - 3980776 | 15068.9 |
| transcriptional regulator, iclr family | SAMN05444680_10756 | Not Available | Negative | 3980802 - 3981581 | 27898.1 |
| acetyl-coa synthetase | SAMN05444680_10757 | Not Available | Positive | 3981773 - 3983332 | 56204.9 |
| acyl dehydratase | SAMN05444680_10758 | Not Available | Positive | 3983360 - 3984508 | 43662.2 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_10759 | Not Available | Positive | 3984608 - 3985828 | 43553.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
