Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate dehydrogenase | SAMN05444680_10740 | Not Available | Negative | 3964194 - 3965159 | 34723.9 |
| transketolase | SAMN05444680_10741 | Not Available | Negative | 3965174 - 3967198 | 72419.9 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444680_10742 | Not Available | Negative | 3967195 - 3968226 | 37937.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_10743 | Not Available | Negative | 3968262 - 3969011 | 25439.1 |
| transketolase | SAMN05444680_10744 | Not Available | Negative | 3969067 - 3970074 | 36203.1 |
| transketolase | SAMN05444680_10745 | Not Available | Negative | 3970071 - 3970931 | 31480.3 |
| trap transporter, dctm subunit | SAMN05444680_10746 | Not Available | Negative | 3970969 - 3972828 | 64755.7 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05444680_10747 | Not Available | Positive | 3973021 - 3973923 | 32934.6 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05444680_10748 | Not Available | Negative | 3973927 - 3974601 | 24483.7 |
| zn-finger domain of cdgsh type-containing protein | SAMN05444680_10749 | Not Available | Negative | 3974629 - 3974856 | 8452.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
