Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_10710 | Not Available | Positive | 3933385 - 3934149 | 26493.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10711 | Not Available | Positive | 3934197 - 3935171 | 34150.5 |
| phosphohistidine phosphatase | SAMN05444680_10712 | Not Available | Negative | 3935226 - 3935603 | 13770.8 |
| acetyl esterase/lipase | SAMN05444680_10713 | Not Available | Negative | 3936651 - 3937568 | 34092.4 |
| udp-glucose 4-epimerase | SAMN05444680_10714 | Not Available | Negative | 3937572 - 3938561 | 35195.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10715 | Not Available | Negative | 3938568 - 3939569 | 34633.3 |
| outer membrane protein (porin) | SAMN05444680_10716 | Not Available | Negative | 3939621 - 3940715 | 38304.0 |
| transcriptional regulator, gntr family | SAMN05444680_10717 | Not Available | Positive | 3940752 - 3941483 | 27464.0 |
| transcriptional regulator, arac family | SAMN05444680_10718 | Not Available | Negative | 3941529 - 3942455 | 33196.9 |
| p-hydroxybenzoate 3-monooxygenase | SAMN05444680_10719 | Not Available | Positive | 3942537 - 3943709 | 43918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
