Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_101321 | Not Available | Positive | 338223 - 338993 | 26979.2 |
| amidohydrolase/hippurate hydrolase | SAMN05444680_101322 | Not Available | Positive | 338977 - 339903 | 32650.2 |
| l-serine ammonia-lyase | SAMN05444680_101323 | Not Available | Positive | 339911 - 341305 | 48649.2 |
| transcriptional regulator, lysr family | SAMN05444680_101324 | Not Available | Negative | 341486 - 342394 | 33456.9 |
| hypothetical protein | SAMN05444680_101325 | Not Available | Positive | 342805 - 343536 | 28487.6 |
| cupin domain-containing protein | SAMN05444680_101326 | Not Available | Positive | 343595 - 344077 | 18003.5 |
| hypothetical protein | SAMN05444680_101327 | Not Available | Positive | 344200 - 345171 | 34526.1 |
| gmp synthase (glutamine-hydrolyzing) | SAMN05444680_101328 | Not Available | Negative | 345878 - 347491 | 59103.2 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN05444680_101329 | Not Available | Negative | 347495 - 347929 | 16060.3 |
| prevent-host-death family protein | SAMN05444680_101330 | Not Available | Negative | 347926 - 348204 | 10541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
