Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine 3-dehydrogenase | SAMN05444680_106260 | Not Available | Negative | 3913970 - 3915004 | 36298.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_106261 | Not Available | Negative | 3915022 - 3915981 | 33433.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_106262 | Not Available | Positive | 3916112 - 3917023 | 32527.5 |
| transposase domain | SAMN05444680_106263 | Not Available | Positive | 3917066 - 3917416 | 12874.5 |
| hypothetical protein | SAMN05444680_106264 | Not Available | Negative | 3917329 - 3917709 | 13791.5 |
| hypothetical protein | SAMN05444680_106265 | Not Available | Positive | 3918073 - 3920226 | 74255.3 |
| dna-binding transcriptional regulator, csgd family | SAMN05444680_106266 | Not Available | Positive | 3920562 - 3921641 | 39636.5 |
| adenylate cyclase, class 3 | SAMN05444680_106267 | Not Available | Positive | 3921823 - 3922548 | 25334.2 |
| aaa atpase domain-containing protein | SAMN05444680_106268 | Not Available | Positive | 3922549 - 3923301 | 27193.7 |
| glutaredoxin-related protein | SAMN05444680_106269 | Not Available | Positive | 3923567 - 3923947 | 14042.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
