Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN05444680_106250 | Not Available | Positive | 3904772 - 3905221 | 16762.5 |
| hypothetical protein | SAMN05444680_106251 | Not Available | Positive | 3905409 - 3905645 | 8670.02 |
| putative abc transport system substrate-binding protein | SAMN05444680_106252 | Not Available | Negative | 3905799 - 3906155 | 12720.6 |
| ipt/tig domain-containing protein | SAMN05444680_106253 | Not Available | Negative | 3906616 - 3908523 | 65849.6 |
| hypothetical protein | SAMN05444680_106254 | Not Available | Negative | 3908899 - 3909102 | 8128.67 |
| integrase core domain-containing protein | SAMN05444680_106255 | Not Available | Negative | 3909118 - 3909402 | 10732.8 |
| fad dependent oxidoreductase | SAMN05444680_106256 | Not Available | Negative | 3909730 - 3911358 | 60236.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_106257 | Not Available | Negative | 3911367 - 3912347 | 33073.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_106258 | Not Available | Positive | 3912487 - 3913371 | 32288.1 |
| hypothetical protein | SAMN05444680_106259 | Not Available | Negative | 3913387 - 3913977 | 21937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
