Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN05444680_106240 | Not Available | Negative | 3895176 - 3896513 | 48036.3 |
| hypothetical protein | SAMN05444680_106241 | Not Available | Negative | 3896761 - 3897174 | 15585.2 |
| undecaprenyl-diphosphatase | SAMN05444680_106242 | Not Available | Positive | 3897852 - 3898499 | 23215.7 |
| arabinose-binding domain of arac transcription regulator, n-term | SAMN05444680_106243 | Not Available | Negative | 3898600 - 3898827 | 8300.19 |
| hypothetical protein | SAMN05444680_106244 | Not Available | Positive | 3899165 - 3899422 | 9654.59 |
| 2-nitropropane dioxygenase precursor | SAMN05444680_106245 | Not Available | Negative | 3899606 - 3900580 | 34434.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_106246 | Not Available | Negative | 3900678 - 3901643 | 34554.8 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444680_106247 | Not Available | Negative | 3901673 - 3902281 | 22677.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_106248 | Not Available | Negative | 3902338 - 3903066 | 26791.2 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_106249 | Not Available | Negative | 3903141 - 3904688 | 54392.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
