Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase propeptide and ypeb domain-containing protein | SAMN05444680_106230 | Not Available | Negative | 3885074 - 3885352 | 10241.3 |
| protein of unknown function | SAMN05444680_106231 | Not Available | Negative | 3886159 - 3886554 | 14443.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_106232 | Not Available | Negative | 3887123 - 3888070 | 34829.5 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444680_106233 | Not Available | Positive | 3888167 - 3888691 | 19186.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_106234 | Not Available | Positive | 3888723 - 3889682 | 34524.9 |
| transcriptional regulator, tetr family | SAMN05444680_106235 | Not Available | Positive | 3889909 - 3890556 | 23261.1 |
| hypothetical protein | SAMN05444680_106236 | Not Available | Negative | 3890672 - 3890911 | 8282.04 |
| transcriptional regulator, lysr family | SAMN05444680_106237 | Not Available | Positive | 3891340 - 3892251 | 32935.4 |
| fad/fmn-containing dehydrogenase | SAMN05444680_106238 | Not Available | Negative | 3892256 - 3893686 | 50456.4 |
| amidase | SAMN05444680_106239 | Not Available | Negative | 3893683 - 3895161 | 53802.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
