Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN05444680_106220 | Not Available | Positive | 3873969 - 3874796 | 29905.7 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444680_106221 | Not Available | Positive | 3874941 - 3875597 | 23736.1 |
| trap transporter, dctm subunit | SAMN05444680_106222 | Not Available | Positive | 3875594 - 3876901 | 46074.6 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444680_106223 | Not Available | Positive | 3876942 - 3877982 | 38078.1 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444680_106224 | Not Available | Positive | 3877989 - 3879362 | 47952.3 |
| 2-keto-4-pentenoate hydratase | SAMN05444680_106225 | Not Available | Positive | 3879338 - 3880132 | 27718.1 |
| 2-keto-4-pentenoate hydratase | SAMN05444680_106226 | Not Available | Positive | 3880163 - 3880933 | 26755.7 |
| alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase | SAMN05444680_106227 | Not Available | Positive | 3880965 - 3882188 | 43828.9 |
| peptidase family s51 | SAMN05444680_106228 | Not Available | Positive | 3883161 - 3884309 | 39433.7 |
| cytochrome b | SAMN05444680_106229 | Not Available | Negative | 3884519 - 3885070 | 20320.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
