Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN05444680_106200 | Not Available | Negative | 3852996 - 3853973 | 35493.4 |
| phenylacetaldehyde dehydrogenase | SAMN05444680_106201 | Not Available | Negative | 3854080 - 3855510 | 50280.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05444680_106202 | Not Available | Negative | 3855612 - 3856421 | 29379.2 |
| dual specificity phosphatase, catalytic domain | SAMN05444680_106203 | Not Available | Negative | 3856492 - 3857019 | 20023.1 |
| transcriptional regulator, trar/dksa family | SAMN05444680_106204 | Not Available | Negative | 3857106 - 3857492 | 14555.2 |
| nad+ synthase (glutamine-hydrolysing) | SAMN05444680_106205 | Not Available | Positive | 3857638 - 3859731 | 76339.9 |
| feruloyl esterase | SAMN05444680_106206 | Not Available | Negative | 3859774 - 3861585 | 62800.0 |
| vanillate o-demethylase ferredoxin subunit | SAMN05444680_106207 | Not Available | Negative | 3861756 - 3862721 | 34869.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_106208 | Not Available | Negative | 3862726 - 3863706 | 34108.4 |
| vanillate o-demethylase monooxygenase subunit | SAMN05444680_106209 | Not Available | Negative | 3863743 - 3864795 | 40036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
