Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_106190 | Not Available | Negative | 3840558 - 3841544 | 34357.6 |
| hypothetical protein | SAMN05444680_106191 | Not Available | Negative | 3841595 - 3842263 | 22858.4 |
| enoyl-coa hydratase | SAMN05444680_106192 | Not Available | Negative | 3842271 - 3843005 | 26610.0 |
| 3-oxoadipate enol-lactonase | SAMN05444680_106193 | Not Available | Negative | 3843034 - 3843858 | 28839.7 |
| 2-furoyl-coa dehydrogenase large subunit | SAMN05444680_106194 | Not Available | Negative | 3843855 - 3846272 | 86805.0 |
| carbon-monoxide dehydrogenase small subunit | SAMN05444680_106195 | Not Available | Negative | 3846265 - 3846786 | 18288.0 |
| carbon-monoxide dehydrogenase medium subunit/2-furoyl-coa dehydrogenase fad binding subunit | SAMN05444680_106196 | Not Available | Negative | 3846807 - 3847697 | 32339.8 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05444680_106197 | Not Available | Positive | 3847916 - 3848875 | 35254.2 |
| amidase | SAMN05444680_106198 | Not Available | Negative | 3848926 - 3850503 | 56159.3 |
| tyramine oxidase | SAMN05444680_106199 | Not Available | Negative | 3850552 - 3852876 | 85482.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
