Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system permease protein | SAMN05444680_106180 | Not Available | Positive | 3831801 - 3832703 | 31424.3 |
| branched-chain amino acid transport system permease protein | SAMN05444680_106181 | Not Available | Positive | 3832700 - 3833695 | 35032.7 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_106182 | Not Available | Positive | 3833692 - 3834456 | 27787.4 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_106183 | Not Available | Positive | 3834449 - 3835171 | 26711.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_106184 | Not Available | Positive | 3835200 - 3835952 | 26153.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444680_106185 | Not Available | Positive | 3835962 - 3836696 | 25890.5 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05444680_106186 | Not Available | Positive | 3836693 - 3838432 | 62696.8 |
| glutathione s-transferase | SAMN05444680_106187 | Not Available | Positive | 3838429 - 3839034 | 22642.0 |
| glycine zipper 2tm domain-containing protein | SAMN05444680_106188 | Not Available | Negative | 3839071 - 3839493 | 13887.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_106189 | Not Available | Negative | 3839642 - 3840433 | 27678.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
