Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_106170 | Not Available | Negative | 3822995 - 3823915 | 32854.0 |
| hypothetical protein | SAMN05444680_106171 | Not Available | Negative | 3824038 - 3824385 | 13000.4 |
| transcriptional regulator, luxr family | SAMN05444680_106172 | Not Available | Negative | 3824583 - 3825737 | 41427.7 |
| hypothetical protein | SAMN05444680_106173 | Not Available | Positive | 3825851 - 3826054 | 6909.5 |
| hypothetical protein | SAMN05444680_106174 | Not Available | Positive | 3826074 - 3826295 | 7835.36 |
| transcriptional regulator, luxr family | SAMN05444680_106175 | Not Available | Positive | 3826292 - 3827206 | 34204.2 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05444680_106176 | Not Available | Negative | 3827257 - 3828675 | 51904.9 |
| gntr family transcriptional regulator, vanillate catabolism transcriptional regulator | SAMN05444680_106177 | Not Available | Negative | 3828772 - 3829500 | 27050.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_106178 | Not Available | Positive | 3829670 - 3830515 | 29227.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_106179 | Not Available | Positive | 3830568 - 3831776 | 43569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
