Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05444680_101311 | Not Available | Negative | 327976 - 328599 | 23045.7 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444680_101312 | Not Available | Negative | 328596 - 330077 | 53598.4 |
| hypothetical protein | SAMN05444680_101313 | Not Available | Positive | 330120 - 330311 | 6535.85 |
| uncharacterized conserved protein yece, duf72 family | SAMN05444680_101314 | Not Available | Positive | 330320 - 331399 | 38938.9 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444680_101315 | Not Available | Negative | 331424 - 332194 | 28424.9 |
| quaternary ammonium compound-resistance protein suge | SAMN05444680_101316 | Not Available | Positive | 332403 - 332723 | 11018.0 |
| protein of unknown function | SAMN05444680_101317 | Not Available | Negative | 332743 - 333312 | 20434.3 |
| atpase, p-type (transporting), had superfamily, subfamily ic | SAMN05444680_101318 | Not Available | Negative | 333374 - 336127 | 98779.5 |
| polyphosphate kinase 2, pa0141 family | SAMN05444680_101319 | Not Available | Positive | 336332 - 337165 | 32471.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_101320 | Not Available | Negative | 337150 - 338094 | 34585.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
