Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN05444680_106140 | Not Available | Negative | 3792191 - 3793333 | 40578.2 |
| hypothetical protein | SAMN05444680_106141 | Not Available | Positive | 3793842 - 3794216 | 13699.0 |
| hypothetical protein | SAMN05444680_106142 | Not Available | Negative | 3794194 - 3794970 | 27975.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_106143 | Not Available | Negative | 3795137 - 3795853 | 26489.3 |
| hypothetical protein | SAMN05444680_106144 | Not Available | Positive | 3796325 - 3796636 | 11207.4 |
| hypothetical protein | SAMN05444680_106145 | Not Available | Negative | 3796808 - 3797392 | 22209.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_106146 | Not Available | Negative | 3797415 - 3798254 | 30036.3 |
| hypothetical protein | SAMN05444680_106147 | Not Available | Negative | 3798266 - 3798586 | 11979.5 |
| acyl-coa dehydrogenase | SAMN05444680_106148 | Not Available | Negative | 3798687 - 3799889 | 43762.6 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444680_106149 | Not Available | Negative | 3799960 - 3800478 | 18607.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
