Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lysine exporter family protein lyse/argo | SAMN05444680_106130 | Not Available | Negative | 3781428 - 3782078 | 22285.7 |
| lysr family transcriptional regulator, chromosome initiation inhibitor | SAMN05444680_106131 | Not Available | Positive | 3782152 - 3783048 | 31533.3 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444680_106132 | Not Available | Negative | 3783054 - 3784352 | 46404.5 |
| hypothetical protein | SAMN05444680_106133 | Not Available | Negative | 3784349 - 3785764 | 49615.2 |
| gaf domain-containing protein | SAMN05444680_106134 | Not Available | Positive | 3785976 - 3786542 | 20622.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_106135 | Not Available | Positive | 3787242 - 3788291 | 38747.9 |
| glycogen debranching enzyme (alpha-1,6-glucosidase) | SAMN05444680_106136 | Not Available | Positive | 3788324 - 3790477 | 79772.3 |
| protein of unknown function | SAMN05444680_106137 | Not Available | Negative | 3790585 - 3790857 | 9941.65 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_106138 | Not Available | Negative | 3790980 - 3791669 | 25222.8 |
| hypothetical protein | SAMN05444680_106139 | Not Available | Positive | 3791803 - 3792123 | 11562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
