Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_106120 | Not Available | Negative | 3772270 - 3772866 | 22029.4 |
| hypothetical protein | SAMN05444680_106121 | Not Available | Negative | 3772966 - 3773196 | 8597.27 |
| transcriptional regulator, lysr family | SAMN05444680_106122 | Not Available | Negative | 3773294 - 3774208 | 33314.9 |
| zinc-binding alcohol dehydrogenase family protein | SAMN05444680_106123 | Not Available | Positive | 3774300 - 3775310 | 35600.0 |
| 1-cys peroxiredoxin | SAMN05444680_106124 | Not Available | Positive | 3775421 - 3776062 | 23483.7 |
| ca-activated chloride channel family protein | SAMN05444680_106125 | Not Available | Positive | 3776283 - 3777317 | 37474.1 |
| dna-binding transcriptional regulator, fadr family | SAMN05444680_106126 | Not Available | Negative | 3777327 - 3778070 | 27209.4 |
| l-alanine-dl-glutamate epimerase | SAMN05444680_106127 | Not Available | Positive | 3778187 - 3779383 | 43945.7 |
| phosphoglycerate dehydrogenase | SAMN05444680_106128 | Not Available | Positive | 3779386 - 3780345 | 34964.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_106129 | Not Available | Positive | 3780390 - 3781409 | 35355.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
