Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructuronate reductase | SAMN05444680_10670 | Not Available | Positive | 3710686 - 3712116 | 50807.0 |
| hypothetical protein | SAMN05444680_10671 | Not Available | Negative | 3712100 - 3712528 | 15103.0 |
| beta-barrel assembly machine subunit bama | SAMN05444680_10672 | Not Available | Positive | 3712717 - 3715104 | 87721.1 |
| outer membrane protein assembly factor bamc | SAMN05444680_10673 | Not Available | Negative | 3715112 - 3716212 | 39839.2 |
| phosphonate utilization associated putative membrane protein | SAMN05444680_10674 | Not Available | Negative | 3716305 - 3717177 | 30088.4 |
| phosphonate degradation operons associated hdig domain protein | SAMN05444680_10675 | Not Available | Negative | 3717174 - 3717731 | 20687.4 |
| transcriptional regulator, gntr family | SAMN05444680_10676 | Not Available | Negative | 3717743 - 3718480 | 27292.9 |
| iron(iii) transport system substrate-binding protein | SAMN05444680_10677 | Not Available | Positive | 3718643 - 3719677 | 37916.4 |
| iron(iii) transport system atp-binding protein | SAMN05444680_10678 | Not Available | Positive | 3719758 - 3720846 | 39898.3 |
| iron(iii) transport system permease protein | SAMN05444680_10679 | Not Available | Positive | 3721009 - 3722670 | 59364.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
