Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleobase:cation symporter-1, ncs1 family | SAMN05444680_101301 | Not Available | Negative | 319866 - 321323 | 52472.2 |
| hypothetical protein | SAMN05444680_101302 | Not Available | Positive | 321400 - 322068 | 23447.1 |
| adenylate cyclase, class 3 | SAMN05444680_101303 | Not Available | Negative | 322065 - 323012 | 34245.7 |
| hypothetical protein | SAMN05444680_101304 | Not Available | Positive | 323319 - 323651 | 12463.3 |
| muramoyltetrapeptide carboxypeptidase | SAMN05444680_101305 | Not Available | Negative | 323711 - 324640 | 33253.1 |
| trna(adenine34) deaminase | SAMN05444680_101306 | Not Available | Negative | 324637 - 325713 | 38769.3 |
| hypothetical protein | SAMN05444680_101307 | Not Available | Negative | 325703 - 325930 | 7869.64 |
| negative transcriptional regulator, paib family | SAMN05444680_101308 | Not Available | Negative | 325932 - 326579 | 24223.0 |
| hypothetical protein | SAMN05444680_101309 | Not Available | Negative | 326625 - 327329 | 24191.1 |
| uncharacterized conserved protein glcg, duf336 family | SAMN05444680_101310 | Not Available | Negative | 327335 - 327844 | 16647.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
