Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase-glutamine amidotransferase | SAMN05444680_10640 | Not Available | Positive | 3677770 - 3678489 | 26071.3 |
| hypothetical protein | SAMN05444680_10641 | Not Available | Negative | 3678511 - 3678741 | 8492.89 |
| reactive intermediate/imine deaminase | SAMN05444680_10642 | Not Available | Negative | 3678799 - 3679167 | 13255.0 |
| n-acyl-d-amino-acid deacylase | SAMN05444680_10643 | Not Available | Negative | 3679164 - 3680636 | 53514.5 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_10644 | Not Available | Negative | 3680669 - 3681667 | 36649.3 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_10645 | Not Available | Negative | 3681664 - 3682701 | 37502.7 |
| peptide/nickel transport system permease protein | SAMN05444680_10646 | Not Available | Negative | 3682719 - 3683558 | 29843.7 |
| peptide/nickel transport system permease protein | SAMN05444680_10647 | Not Available | Negative | 3683993 - 3684928 | 33789.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05444680_10648 | Not Available | Negative | 3684950 - 3686536 | 57201.6 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05444680_10649 | Not Available | Negative | 3686586 - 3688040 | 51631.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
