Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_105277 | Not Available | Positive | 3635409 - 3637100 | 61353.4 |
| hypothetical protein | SAMN05444680_1061 | Not Available | Positive | 3637239 - 3637314 | 2509.25 |
| arginine:ornithine antiporter, apa family | SAMN05444680_1062 | Not Available | Negative | 3637281 - 3638702 | 51097.8 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN05444680_1063 | Not Available | Positive | 3639217 - 3639909 | 24287.8 |
| gaf domain-containing protein | SAMN05444680_1064 | Not Available | Negative | 3640062 - 3640607 | 19884.8 |
| mfs transporter, putative metabolite:h+ symporter | SAMN05444680_1065 | Not Available | Negative | 3640604 - 3641965 | 49349.6 |
| imidazolonepropionase | SAMN05444680_1066 | Not Available | Negative | 3641999 - 3643234 | 44041.7 |
| transcriptional regulator, lysr family | SAMN05444680_1067 | Not Available | Positive | 3643365 - 3644360 | 37377.5 |
| signal transduction histidine kinase | SAMN05444680_1068 | Not Available | Positive | 3644534 - 3645838 | 47132.4 |
| two-component system, ompr family, response regulator | SAMN05444680_1069 | Not Available | Positive | 3645861 - 3646616 | 28553.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
