Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized short protein ybdd, duf466 family | SAMN05444680_101291 | Not Available | Positive | 312242 - 312457 | 8094.7 |
| hypothetical protein | SAMN05444680_101292 | Not Available | Negative | 312463 - 313386 | 31903.3 |
| upf0755 protein | SAMN05444680_101293 | Not Available | Positive | 313399 - 314496 | 40232.1 |
| dtmp kinase | SAMN05444680_101294 | Not Available | Positive | 314493 - 315152 | 23628.2 |
| dna polymerase-3 subunit delta' | SAMN05444680_101295 | Not Available | Positive | 315214 - 316233 | 36725.3 |
| type iv pilus assembly protein pilz | SAMN05444680_101296 | Not Available | Positive | 316230 - 316604 | 13324.0 |
| tatd dnase family protein | SAMN05444680_101297 | Not Available | Positive | 316674 - 317480 | 29699.2 |
| hypothetical protein | SAMN05444680_101298 | Not Available | Positive | 317477 - 318145 | 24245.2 |
| sulfite dehydrogenase (cytochrome) subunit sorb | SAMN05444680_101299 | Not Available | Negative | 318268 - 318606 | 12383.1 |
| sulfite dehydrogenase (cytochrome) subunit sora apoprotein | SAMN05444680_101300 | Not Available | Negative | 318619 - 319848 | 44327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
