Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,5-dihydroxypyridine 5,6-dioxygenase | SAMN05444680_105236 | Not Available | Negative | 3596549 - 3597625 | 39590.4 |
| transcriptional regulator, tetr family | SAMN05444680_105237 | Not Available | Positive | 3597760 - 3598338 | 21284.6 |
| acetyl-coa c-acetyltransferase | SAMN05444680_105238 | Not Available | Negative | 3598404 - 3599588 | 40770.4 |
| isocitrate dehydrogenase kinase/phosphatase | SAMN05444680_105239 | Not Available | Negative | 3599613 - 3601427 | 70231.0 |
| carbonic anhydrase | SAMN05444680_105240 | Not Available | Negative | 3601449 - 3602150 | 26331.2 |
| dna-binding transcriptional regulator, merr family | SAMN05444680_105241 | Not Available | Negative | 3602194 - 3602589 | 14917.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444680_105242 | Not Available | Positive | 3602686 - 3603747 | 39348.3 |
| serine/threonine protein kinase | SAMN05444680_105243 | Not Available | Positive | 3603744 - 3605066 | 48108.8 |
| trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthase | SAMN05444680_105244 | Not Available | Positive | 3605063 - 3605983 | 35029.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_105245 | Not Available | Positive | 3606041 - 3606811 | 27175.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
