Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hippurate hydrolase | SAMN05444680_101281 | Not Available | Negative | 299829 - 301004 | 41884.2 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_101282 | Not Available | Negative | 301036 - 302355 | 45938.4 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_101283 | Not Available | Negative | 302458 - 304050 | 57644.9 |
| 4-hydroxybutyrate dehydrogenase | SAMN05444680_101284 | Not Available | Negative | 304142 - 305278 | 40142.4 |
| acetyl esterase | SAMN05444680_101285 | Not Available | Positive | 305399 - 306334 | 33251.8 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | SAMN05444680_101286 | Not Available | Positive | 306331 - 307212 | 32755.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_101287 | Not Available | Positive | 307296 - 308024 | 26707.3 |
| two-component system, narl family, sensor kinase | SAMN05444680_101288 | Not Available | Positive | 308081 - 309442 | 50019.0 |
| two component transcriptional regulator, luxr family | SAMN05444680_101289 | Not Available | Positive | 309439 - 310068 | 22873.7 |
| carbon starvation protein | SAMN05444680_101290 | Not Available | Positive | 310176 - 312245 | 73542.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
