Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101261 | Not Available | Positive | 279829 - 280260 | 15989.2 |
| hypothetical protein | SAMN05444680_101262 | Not Available | Positive | 280289 - 281563 | 48155.9 |
| hypothetical protein | SAMN05444680_101263 | Not Available | Positive | 281619 - 283109 | 54208.9 |
| hypothetical protein | SAMN05444680_101264 | Not Available | Positive | 283106 - 284332 | 46676.0 |
| major type 1 subunit fimbrin (pilin) | SAMN05444680_101265 | Not Available | Negative | 284392 - 285435 | 37150.3 |
| fimbrial chaperone protein | SAMN05444680_101266 | Not Available | Negative | 285432 - 286175 | 27142.6 |
| outer membrane usher protein | SAMN05444680_101267 | Not Available | Negative | 286193 - 288739 | 90159.1 |
| major type 1 subunit fimbrin (pilin) | SAMN05444680_101268 | Not Available | Negative | 288830 - 289336 | 17182.2 |
| hypothetical protein | SAMN05444680_101269 | Not Available | Negative | 289999 - 290355 | 13035.4 |
| glutathione s-transferase | SAMN05444680_101270 | Not Available | Negative | 290460 - 291119 | 24608.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
