Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase (nadh) small subunit | SAMN05444680_104453 | Not Available | Negative | 3197693 - 3199171 | 53655.9 |
| glutamate synthase (nadh) large subunit | SAMN05444680_104454 | Not Available | Negative | 3199205 - 3203947 | 172609.0 |
| putative transposase | SAMN05444680_104455 | Not Available | Negative | 3204124 - 3204825 | 26671.9 |
| methyltransferase domain-containing protein | SAMN05444680_104456 | Not Available | Negative | 3204847 - 3205716 | 32275.0 |
| hypothetical protein | SAMN05444680_104457 | Not Available | Negative | 3205713 - 3206285 | 21091.6 |
| cyanate permease | SAMN05444680_104458 | Not Available | Negative | 3206282 - 3207544 | 42706.4 |
| dgtpase | SAMN05444680_104459 | Not Available | Negative | 3207541 - 3208671 | 42802.5 |
| 3-dehydroquinate synthase | SAMN05444680_104460 | Not Available | Negative | 3208681 - 3209784 | 38969.4 |
| shikimate kinase | SAMN05444680_104461 | Not Available | Negative | 3209820 - 3210365 | 19824.9 |
| type iv pilus assembly protein pilq | SAMN05444680_104462 | Not Available | Negative | 3210388 - 3212562 | 77327.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
