Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate 1-epimerase | SAMN05444680_104433 | Not Available | Negative | 3181251 - 3182057 | 29155.7 |
| na+/h+-dicarboxylate symporter | SAMN05444680_104434 | Not Available | Positive | 3182228 - 3183535 | 46607.5 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_104435 | Not Available | Positive | 3183544 - 3184482 | 34034.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05444680_104436 | Not Available | Negative | 3184607 - 3185350 | 26279.4 |
| glutamine amidotransferase | SAMN05444680_104437 | Not Available | Negative | 3185486 - 3186136 | 23864.3 |
| imidazoleglycerol-phosphate dehydratase | SAMN05444680_104438 | Not Available | Negative | 3186168 - 3186797 | 22351.7 |
| histidinol phosphate aminotransferase apoenzyme | SAMN05444680_104439 | Not Available | Negative | 3186794 - 3187885 | 39299.9 |
| hypothetical protein | SAMN05444680_104440 | Not Available | Negative | 3187891 - 3188241 | 12859.5 |
| histidinol dehydrogenase | SAMN05444680_104441 | Not Available | Negative | 3188241 - 3189557 | 46492.2 |
| atp phosphoribosyltransferase (homohexameric) | SAMN05444680_104442 | Not Available | Negative | 3189565 - 3190206 | 23062.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
